2/ As you know I'm currently involved in researching (literature) for some answers to fungal interactions. You have injected time consideration into the mix. Unfortunately I am yet no expert at the microscopic identification of fungal species. However, when rooting cuttings in sphagnum peat moss, I have seen roots emergent with fungi mycelia apparently radiating out from the roots. This definitely merits investigation. My top of head hypothesis is that the fungi association came from spores laying dormant in the peat. Besides the AM fungi potential infection of cannabis roots, I encourage that thought be given to the synergistic relationship with other fruiting and non-fruiting fungi, per se even ectomycorrhizal. As I mention in my growing method outline we had several varieties of mushrooms growing along with the plants, which I'm fairly certain delivered nutrients to the root systems.
I'm not surprised, I've had it appear in coir too. Do soil spores ever go airborne?
Also, not sure it's related, but when I use aerated tea on my coir rooting pucks, I get better rooting speeds. I have noticed good fungal growth forming on the roots as they poke out the sides of the pucks. This synergistic association you mention, could it possibly begin in the rooting phase?