I don't think fulvic or humic acid cause N toxicity. Chemical compounds with N are usually soluble, so these acids don't increase N concentration. I never had problems in soil using it.
I did have problems when I used these acids in a hydroponic grow where GH Mineral Magic was used at the same time. The conclusion we made was that the problem was due to aluminum toxicity. This metal can be chelated by the humic/fulvic acids, making it soluble and available for root intake, and it really is phytotoxic.
Check for metals that can be chelated. Some of them are toxic when dissolved, but not in a insoluble manner.
Good luck
Interesting how would you check for metals, my source water is rainwater which I run through a UV sterilizer and triple filters before I add Nutrients and feed to the plants, we are probably one of the cleanest air countries in the world in Aus and I live way out in the sticks Im guessing to say the water is top quality nearly on par with RO.