Summary
By outcrossing the S population with their Brothers from the full-sib generation, you’re:- Reinforcing desirable traits from the S generation while introducing the genetic diversity of the F1 mothers
- Increasing fitness and hybrid vigour (heterosis), which is essential for ensuring strong, healthy plants that can thrive under various growing conditions
- Aiming to maintain 88% heterosis in the final line through careful backcrossing to a pure line (Afghan or Thai) to ensure vigour and stability
- Outcrossing and backcrossing will allow you to maintain the genetic diversity required for vigour while stabilising traits like flowering time, structure, and resin production
1. Establish Initial Crosses and Select F1 Plants
Goal: Create genetic diversity and select strong plants with desirable traits- Step 1.1: Cross Afghan and Thai lines
- Perform reciprocal crosses between the Afghan and Thai lines (Afghan x Thai and Thai x Afghan). These are your F1 hybrids.
- These F1 plants will exhibit hybrid vigour (heterosis), but will still be quite genetically diverse.
- Step 1.2: Open-pollinate and grow F1 generation
- Grow a large batch of F1 plants from both reciprocal crosses (Afghan x Thai and Thai x Afghan).
- Ensure you grow enough plants (at least 20-30 per cross) to capture diversity and identify the best phenotypes.
- Step 1.3: Select for desirable traits
- Focus on selecting the plants that best exhibit your desired traits:
- Flowering time (early to moderate flowering)
- Plant structure (compact, strong branches)
- Resin production (high quality, good yield)
- Keep both male and female plants that show the best traits to carry forward into the next generation.
- Focus on selecting the plants that best exhibit your desired traits:
2. Create the S Population and Stabilise Traits
Goal: Fix the desirable traits within a stable population.- Step 2.1: Self-pollinate the best female plants from the F1 generation
- From the F1 plants that exhibit the best traits, self-pollinate the best females to produce S1 seeds.
- Use the males from the same generation (F1) for pollination or use other F1 males with good traits.
- Step 2.2: Grow S1 generation and evaluate
- Different flowering times, structures, and resin levels.
- Some plants may be phenotypically superior, exhibiting enhanced vigour, structure, or resin production.
Step 2.2: Evaluate and Select for Desired Traits
- As the plants begin to mature, evaluate the F2 generation for the traitsyou want to enhance in your synthetic line.
- Resin production: Select plants with high resin content.
- Plant structure: Choose plants that are robust and have good branching, height, and compactness.
- Flowering time: Select plants that flower faster or match your target flowering range.
- The idea here is to pick the best-performing plants from the genetic diversity created by the open-pollination process.
- Grow the S1 plants, selecting those that continue to show the desirable traits from the initial F1 generation (e.g., resin production, structure, flowering time).
- The goal here is to stabilise these traits and weed out any unwanted traits or genetic weaknesses. Continue to self-pollinate the best plants in the S1 generation to create S2.
- Step 2.3: Self-pollinate S1 plants to create S2 generation
Step 2.3: Save Seeds from Selected Plants
- Once you have identified the top-performing plants, collect seeds from these selected individuals to use as parents for future generations. This will form the base for your Selfed population (S population), which you can further stabilise and develop.
These F2 seeds will be part of the next generation in your breeding programme and will provide a mix of genetic diversity with enhanced traits for further selection.
- Once you have identified the top-performing plants, collect seeds from these selected individuals to use as parents for future generations. This will form the base for your Selfed population (S population), which you can further stabilise and develop.
- After evaluating and selecting the best S1 plants, self-pollinate them to produce S2 seeds.
- Focus on reinforcing the stability of the desired traits. By now, you should start seeing a more consistent expression of the selected traits in your selfed plants.
- Step 2.4: Continue selection for stability
- Grow the S2 generation and select the best individuals again. At this stage, you should be seeing more stable, consistent traits in the plants. Continue self-pollination for a few more generations (S3, S4) to further stabilise the desired traits.
3. Outcrossing S Population to Full-Sib Mothers (F1 Generation)
Goal: Increase genetic diversity and reinforce hybrid vigour, while stabilising traits from the S population.- Step 3.1: Select top S2/S3 plants for outcrossing
- Choose the best S2 or S3 plants (those that show high stability for your desired traits: flowering time, resin, structure, etc.).
- Step 3.2: Outcross selected S plants with their full-sib bothers
- Cross the selected S2/S3 plants (which have stabilised traits) with their full-sib bothers (from the original F1 generation).
- These full-sib mothers should still be robust plants, showing some of the hybrid vigour from the initial Afghan x Thai cross.
- Step 3.3: Grow out the resulting offspring (F4 generation)
- Grow out the offspring from this outcross and evaluate them for hybrid vigour and the stability of desirable traits.
- The F4 generation should have a balance of stable S traits and hybrid vigour from the full-sib mothers. This will help reinforce fitness and improve overall performance.
- Step 3.4: Select the best outcrossed plants
- From the outcrossed F4 generation, select the best plants exhibiting both stability (from the S population) and vigour (from the full-sib bothers).
- These selected plants will be the foundation for the next generations and will continue to drive both vigour and stability.
3. Stabilising Traits and Creating the S Population
Goal: Select and self-pollinate the most stable, desirable plants to fix traits in the S population.
Step 3.1: Select the Best F2 Plants for Selfing (S1 Generation)
- Choose the best-performing F2 plants that have the most stable expressions of the desirable traits.
- These plants will be used for self-pollination to create the S1 generation.
Step 3.2: Self-Pollinate the F2 Plants
- Self-pollinate the selected F2 plants to produce S1 seeds.
- This will fix some of the traits in the S1 generation and help create a more genetically stable population.
Step 3.3: Grow S1 Plants and Select for Stability
- Once the S1 seeds are grown, evaluate the plants for stability of the selected traits.
- Continue selecting for uniformity and high performance, gradually stabilising traits such as flowering time, structure, and resin production.
4. Backcross to Pure Line for 88% Heterosis
Goal: Maintain heterosis (hybrid vigour) while stabilising traits and ensuring fitness.- Step 4.1: Select F4 plants for backcrossing to pure Afghan/Thai line
- Choose the best F4 plants that exhibit both stability and vigour.
- Backcross these F4 plants to a pure Afghan or Thai male (depending on your ultimate goal — Afghan traits or Thai traits) to infuse more genetic material from the pure line.
- Step 4.2: Perform backcross and grow out BC1 (first backcross generation)
- Backcross the selected F4 plants with the pure Afghan/Thai male. This produces the BC1 generation.
- Evaluate these plants for heterosis, fitness, and trait stability. They should show a blend of vigour from the Afghan/Thai pure line and stabilised traits from the F4 line.
- Step 4.3: Select the best BC1 plants for continued backcrossing
- Select plants from the BC1 generation that show the best traits in terms of vigour and stability.
- Continue the backcrossing process (BC2, BC3) to reinforce hybrid vigour while maintaining 88% heterosis (the goal is to keep as much vigour as possible while increasing genetic stability).
- Step 4.4: Backcross and evaluate
- After a few rounds of backcrossing (BC2, BC3), you should start to see the desired traits becoming more stabilised, while still maintaining heterosis. This phase should focus on both improving the consistency of the traits and preserving vigour.
4. Continue to Create S Populations and Stabilise Traits
Goal: Continue stabilising the selected traits through multiple generations of self-pollination.Step 4.1: Self-Pollinate S1 Plants to Create S2 Generation
- After selecting the best plants from the S1 generation, self-pollinate them again to produce S2 seeds.
- This will further stabilise the traits you want and increase genetic uniformity in your line.
Step 4.2: Repeat the Process (S3, S4, etc.)
- Continue this process over several generations of self-pollination (S2, S3, S4, etc.) until you achieve a stable population where the desirable traits are consistently expressed.
- Over time, this process will reduce genetic variability within your population, but you’ll have a stable foundationfor future outcrossing and hybridisation.
5. Maintain 88% Heterosis Through Selection and Crosses
Goal: Maintain vigour while fixing traits for future stability and use in breeding.- Step 5.1: Continue selection in BC4, BC5 generations
- Continue selecting the most vigorous and stable plants in each successive backcross generation.
- By BC4 or BC5, you should have a population that maintains 88% heterosis from the original hybrid vigour while also showing stable traits, like flowering time, resin production, and plant structure.
- Step 5.2: Final outcross to pure Afghan or Thai male
- After several backcrosses (BC4, BC5), perform one last outcross to a pure Afghan or Thai male to ensure you maintain that final dose of heterosis while stabilising key traits.
- Step 5.3: Stabilisation and final selection
- Once you have your F6 or F7 generation (from the BC6 generation onwards), continue to select for the best plants that show the perfect balance between stable traits and hybrid vigour. At this point, the line should be consistent and predictable in terms of its flowering time, resin production, structure, and general performance.
- Step 5.4: Achieve final stabilisation
- At this stage, the population should be a stable line that can be used for further breeding, propagation, or commercial production. The goal is for a robust, stable, and vigorous population with 88% heterosis maintained throughout.
5. Outcrossing to Maintain Heterosis and Fitness
Goal: Introduce fresh genetic material to maintain hybrid vigour and fitness.Once you’ve stabilised traits in the S population (S1, S2, S3), you can begin outcrossing to maintain vigour and create an optimal breeding pool for future generations.
Step 5.1: Outcross S Population to Full-Sib Mothers
- Select the best plants from the S2 or S3 generation and outcross them with their full-sib mothers (F1 plants). This will help increase the genetic diversity and maintain hybrid vigour.
- This cross will maintain the desired traits from the S population while improving overall fitness and resilience.
Step 5.2: Continue Selection and Crosses
- Select the best outcrossed plants and continue backcrossing and selecting for the most stable and vigorous traits. This will ultimately lead to a line that combines both stability and hybrid vigour.
1. Initial Crosses (Afghan x Thai, Thai x Afghan) → F1 Generation
Goal: Create hybrid vigour (Heterosis) and generate genetic diversity.- Crossing the Afghan and Thai lines:
- Afghan x Thai and Thai x Afghan reciprocal crosses.
- This generates F1 hybrids, where you’ll see hybrid vigour, but the plants will still be genetically diverse. Each reciprocal cross gives you a slightly different genetic expression, so you can compare them in the next steps.
- F1 traits will include an initial mix of Afghan and Thai characteristics (resin, structure, flowering time, etc).
- Open-pollinate the F1 plants to further increase genetic diversity. You can allow both male and female plants to pollinate freely, or manually control pollination, depending on your objectives.
2. Self-Pollination of F1 Plants → S Population (S1, S2, S3)
Goal: Stabilise and select for desirable traits by self-pollinating F1 plants.- Self-pollination of F1 plants:
- Choose the best F1 females that exhibit the most promising traits (e.g., resin, flowering time, plant structure) and self-pollinate them. You can also self-pollinate male plants if you want to explore pollen genetics as well.
- S1 Generation:
- These seeds will represent the first selfed generation of the F1 plants. At this stage, the plants should show a bit more consistency in the traits you selected in the F1 generation but will still retain some genetic diversity.
- Selecting for S2 Generation:
- From the S1 generation, choose the best plants that most consistently exhibit your selected traits. Self-pollinate these to produce S2 seeds.
- S2 and S3 Generations:
- Continue selecting the most consistent, vigorous plants from S2 and S3 generations.
- The goal is to fix traits like flowering time, plant structure, and resin production. By the time you reach S3, you should start seeing more stable expressions of these traits.
3. Outcross S Population to Full-Sib Mothers → F4 Generation (Hybrid Vigour + Stability)
Goal: Enhance hybrid vigour and stabilise traits by outcrossing.- Outcross S population to full-sib mothers:
- Choose top-performing plants from the S2/S3 generations and cross them with full-sib mothers (i.e., the best plants from the initial F1 generation).
- This introduces hybrid vigour (heterosis) back into the population, as the F1 plants carry a diverse genetic base.
- F4 Generation:
- The offspring from this outcross will carry hybrid vigour (from the F1 and pure parent genetics) while showing stability in the selected traits (e.g., flowering, resin).
- You’ll need to grow out these F4 plants, evaluate them, and select the best plants for their vigour and stability.
4. Backcross F4 Plants to Pure Afghan or Thai → BC1 Generation
Goal: Reinforce desirable traits from pure Afghan or Thai lines to preserve vigour and stability.- Backcrossing F4 plants to a pure Afghan or Thai:
- From your F4 plants, choose the best phenotypes (plants with desirable traits such as resin production, structure, etc.) and backcross them to a pure Afghan or Thai male.
- The BC1 generation will have a genetic blend of 50% pure Afghan or Thai genetics and 50% from the hybrid (F4), which brings in some stability and vigour from the pure parent.
- Evaluate the BC1 generation for desired traits and vigour. Select the top-performing plants for further backcrossing.
5. Continue Backcrossing (BC2, BC3, BC4, BC5) to Maintain 88% Heterosis
Goal: Maintain hybrid vigour while stabilising traits.- Backcross the BC1 plants to pure Afghan or Thai (BC2, BC3, BC4, BC5):
- Each backcross generation increases the genetic contribution from the pure Afghan or Thai line, while maintaining 88% heterosis (hybrid vigour).
- The BC2 generation will be 75% Afghan or Thai, BC3 will be 87.5%, and so on. With each successive generation, the line becomes more stabilised while still retaining the hybrid vigour.
- Selection in BC2 to BC5:
- Continue selecting the best plants from each generation for vigour, stability, and your target traits. Select the plants that show the best balance of stability (from Afghan or Thai) and vigour (from the hybrid).
- At BC5 (or possibly earlier), you should have a population that consistently expresses the desired traits while maintaining 88% hybrid vigour. This is where you want to stabilise your breeding line.
6. Final Outcrossing to Pure Afghan or Thai for Ultimate Stability
Goal: Final outcross to enhance stability and solidify genetic traits.- Outcross BC5 generation to a pure Afghan or Thai:
- To ensure the final genetic stability and preserve the vigour of the line, perform a final outcross to a pure Afghan or Thai male.
- This step can improve the consistency and final stabilisation of traits like flowering time, resin, and structure.
- The outcross helps balance the heterosis and stabilises the final line, providing an ideal population for future breeding, cultivation, or commercial use.
7. Select and Stabilise Traits in the Final Generations
Goal: Achieve a stable, vigorous line with consistent expression of desirable traits.- Selection and stabilisation in the final generations:
- By now, you should have a line that consistently expresses the desired characteristics: early flowering, strong plant structure, high resin production, etc.
- Continue selecting the best plants from the final generations (BC6, BC7, F6, etc.) to fine-tune the traits and stabilise any remaining inconsistencies.
- Final stable line:
- After selecting the top performers from these final generations, you will have a stable, vigorous line that carries 88% heterosis, meaning the plants will show both hybrid vigour and consistent desirable traits.
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