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Genetic discovery points the way to much bigger yields in tomato, other flowering foo

Weird

3rd-Eye Jedi
Veteran
Genetic discovery points the way to much bigger yields in tomato, other flowering food plants
Scientists learn how tweaking a 'hybrid vigor' gene generates higher crop yields



IMAGE: Associate professor Zach Lippman has found a way to dramatically increase tomato yields by tweaking a type of hybrid vigor. His work suggests that this finding may be more generally...
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Cold Spring Harbor, NY – Every gardener knows the look of a ripe tomato. That bright red color, that warm earthy smell, and the sweet juicy flavor are hard to resist. But commercial tomato plants have a very different look from the backyard garden variety, which can grow endlessly under the right conditions to become tall and lanky. Tomatoes that will be canned for sauces and juice are harvested from plants that stop growing earlier than classic tomato varieties, and are therefore more like bushes. While the architecture of these compact bushy plants allows mechanical harvesters to reap the crop, the early end of growth means that each plant produces fewer fruits than their home garden cousins.

But what if commercial tomato growers could coax plants into producing more fruit without sacrificing that unique and necessary bushy plant shape? Today, CSHL researchers announced that they have determined a way to accomplish this. Their research has revealed one genetic mechanism for hybrid vigor, a property of plant breeding that has been exploited to boost yield since the early 20th century. Teasing out the hidden subtleties of a type of hybrid vigor involving just one gene has provided the scientists with means to tweak the length of time that bushy tomato varieties can produce flowers. In these plants, longer flowering time substantially raises fruit yield.

First identified at CSHL by George Shull in 1908, hybrid vigor – or heterosis, as biologists call it – involves interbreeding genetically distinct plants to generate offspring more robust than either inbred parent. It has been used for decades to improve agricultural productivity, but scientists have long debated how and why it works.

In his previous work, CSHL Associate Professor Zach Lippman and Israeli colleagues identified a rare example of hybrid vigor involving a genetic defect in the gene that makes florigen, a hormone that controls the process of flowering and flower production. The mutation dramatically increases tomato yields in bush tomatoes, and Lippman and his team, led by postdoctoral researcher Ke Jiang, set out to understand the mechanism behind this remarkable result.



IMAGE: A mutation in the hormone that controls flowering postpones when a plant stops producing flowers, yielding many more fruits.
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They found that bushy plants with a mutation in one of the two copies of the florigen gene, producing half as much florigen as plants without the mutation do, postpone the moment when they stop producing flowers. This, in turn, leads to many more fruits overall. "This is because," Lippman explains, "bushy tomato varieties are highly sensitive to the amount, or dosage, of the florigen hormone, which alters plant architecture – that is, how many flowers can form before growth ends. These discoveries lead to an exciting prediction: that it may be possible to tweak florigen levels to increase yields even further."

Lippman's team also studied florigen mutants in another plant, the crucifer weed known as Arabidopsis that is a cousin of crops like broccoli and cauliflower. Although they did not see the same increase in yield, they did observe similar changes in plant architecture because of florigen dosage sensitivities. These results suggest that it may be possible to manipulate florigen in a wide variety of flowering species to increase yields.

###

This work was supported by an NSF Graduate Research Fellowship and the NSF Plant Genome Research Program.

"Tomato Yield Heterosis is Triggered by a Dosage Sensitivity of the Florigen Pathway that Fine-Tunes Shoot Architecture" appears online in PLOS Genetics on December 26, 2013. The authors are: Ke Jiang, Katie Liberatore, Soon Ju Park, John Alvarez, and Zach Lippman. The paper can be obtained online at:

http://www.plosgenetics.org/doi/pgen.1004043

About Cold Spring Harbor Laboratory Founded in 1890, Cold Spring Harbor Laboratory (CSHL) has shaped contemporary biomedical research and education with programs in cancer, neuroscience, plant biology and quantitative biology. CSHL is ranked number one in the world by Thomson Reuters for the impact of its research in molecular biology and genetics. The Laboratory has been home to eight Nobel Prize winners. Today, CSHL's multidisciplinary scientific community is more than 600 researchers and technicians strong and its Meetings & Courses program hosts more than 12,000 scientists from around the world each year to its Long Island campus and its China center. For more information, visit

http://www.cshl.edu.
 

Weird

3rd-Eye Jedi
Veteran
looks like they identified and isolated a natural genetic anomaly that lends to greater yield of flower mass in hybrids
 

dank.frank

ef.yu.se.ka.e.em
ICMag Donor
Veteran
so the immediate question, for me, is if you can isolate plants that naturally produce more of this hormone, and then breed them together - to create genetic lines that are naturally higher yielding, without the need for substitution an additional amount of the hormone...

Since this is being done in Israel - YOU KNOW - they will be looking into cannabis crops as well for this; they are after all one of the leading nations performing scientific studies on our favorite plant...



dank.Frank
 

MIway

Registered User
Veteran
im not sure from the paragraph... is it less florigen that allows for longer flowering, or more florigen? if its less, then we wouldnt be adding any hormones, but repressing it instead...
 

Pangea

Active member
Veteran
From reddit about this press release:

Sluisifer:

Plant biologist here! (apologies to /u/Unidan )
Lots and lots of misinformation in this thread, so I thought I'd try to clear some things up.

Florigen: For a long time it's been known that there's a graft-transmissible signal that can induce flowering in many plants. This was dubbed 'florigen', and research into finding this has been ongoing for about 80 years. I say ongoing because a simple molecule was never found to be the hypothesized florigen.

Currently, however, it's quite well accepted that FT (Flowering Locus T) mediates a core flowering pathway. By the internal coincidence model, the circadian clock induces FT when CO (CONSTANS) levels are sufficiently high as a result of sufficiently long days in the case of long-day flowering plants. This light-mediated signalling occurs in the leaves, and the signal must be sent to the Shoot Apical Meristem (SAM) to induce the floral transition.

Here's a good review on the subject, though somewhat outdated:
Turck, F., Fornara, F. & Coupland, G. Regulation and Identity of Florigen: FLOWERING LOCUS T Moves Center Stage. Annu. Rev. Plant Biol. 59, 573–594 (2008).

For most purposes, FT can be considered the florigen, but it's really irrelevant to this paper because it's not about flowering at all, really. This paper is truly about heterosis.

Heterosis: Heterosis is also known as hybrid vigor. More specifically, heterosis refers to extra vigor that cannot be explained via Mendelian inheritance. This means that heterosis isn't a result of a particular combination of certain alleles, or an increased level of heterozygosity at many loci.

In a canonical example, you can take two inbred varieties of corn and cross them together. The resulting progeny (the F1 generation) will be much taller and vigorous. The next generation (F2), however, won't display this increased vigor. If this was a Mendelian mechanism, you would expect some fraction of the F2 generation to display varying degrees of this vigor, but this isn't the case.

Multiple hypotheses have been proposed to explain heterosis, and they're not necessarily mutually exclusive. Recent work has shown that epigenetic phenomenon play a role, as evidenced by changes in small RNA populations in plants.

In this paper, they're addressing the 'overdominance' hypothesis for heterosis for a particular locus (i.e. the SFT gene, which is the tomato ortholog of FT). This hypothesis essentially posits a dosage role for vigor behavior, where a single copy of an allele is ideally suited to vigor, and that a homozygote will be inferior. You can think of this as being a finely-tuned amount of a given gene.

In their work, the authors show that this appears to be the case for SFT in the sp mutant background. In other words, the interesting result of this paper is the heterotic behavior at this locus, and has little to do with yield or florigen behavior which has been previously characterized (Krieger U, Lippman ZB, Zamir D (2010) The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato. Nat Genet 42: 459–463.)

TL;DR: The authors of the press release and this post got it wrong. This isn't an interesting discovery about potential tomato yield; it's about the behavior of obscure genetic phenomena primarily of interest to geneticists and developmental biologists.
If you really wanted to improve yield via plant architecture, dozens of mutants have already been identified with a wide variety of effects. The problem with these, generally, is that more isn't always better. Most things in biology are tradeoffs, so blindly making more or bigger of something usually comes at a cost, whether to the robustness of the plant, the quality of the fruit, or some other factor.
 

ronbo51

Member
Veteran
So, I just opened up my first seed catalog of the year and noticed some new and very interesting stuff. The seed company is Johnny's Selected Seeds from central Maine. They run a tight ship as far as GMO and all that. They have been certified organic forever. Anyway they are offering grafted tomato plants for sale as well as root stock for tomatoes, as well as grafting tools and equipment. Now you can buy selected seed and graft it onto rootstock with known characteristics, such as vigor, disease resistance, growth habit, productivity, that pass these traits onto the grafted growth tip. I think this is pretty cool. Someone in the canna biz with vision should be growing thousands of clones in agar filled test tubes doing rootstock research so that future clones will be supercharged. Traditional plant breeding has come a long way. There is a LOT of room out there for cannabis.
 
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